PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00440.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 567aa    MW: 61291.2 Da    PI: 6.2751
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00440.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.7e-30313371259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d +++++tYeg+Hnh+
  Migut.M00440.1.p 313 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCADDRTILTTTYEGNHNHP 371
                       7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-33297373IPR003657WRKY domain
SuperFamilySSF1182901.57E-27305373IPR003657WRKY domain
PROSITE profilePS5081129.207307373IPR003657WRKY domain
SMARTSM007742.4E-36312372IPR003657WRKY domain
PfamPF031061.2E-26314371IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MILITVQSHS FLRRKPHSGN PKFKPPYTTT SFSMDGAPPP PPPPPHTIQF GLSCRALRDD  60
DDDDDGGDCL PPPDNGKRKV MDEMDFFSDK KLGGGGAAGG DAGEDGRTLH GSNSVLNFNV  120
NTGLHLLTPA NTGSDESIVD KQTSSNSENK RSNSEMIFLQ AEMERMNSEN RHLKEMLNQV  180
ENDYTGLQMQ LMTIMQNQHQ TDRHQNQDDE EHVIKNGNGI HNNNNNGVLV PRQFMDLGFG  240
TNDDVLLTSP ERRDPPPPTP TDKDVGDEQS PENNKVPKLS HPPRNSTVDQ ATEATMRKAR  300
VSVRARSEAP MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AAGCPVRKQV QRCADDRTIL  360
TTTYEGNHNH PLPPAAMAMA STTSSAAKML LSGSMPSADG LMNSNNFLAR TLLPQLPCSS  420
NMATISASAP FPTITLDLTQ SPANPLQFPK IPSNQFTLPF LNPLLNNIAN INPNAAALLP  480
QIFGQAAYNQ SKFSGLQMSS QDHQGTSNNQ LPPPFQLNDT VNALATDPNF TAALAAAISS  540
LMTGPYGNNG DSSGANGGNN NNGSIN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-21299375176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012841457.10.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9C5191e-132WRKY6_ARATH; WRKY transcription factor 6
TrEMBLA0A022R3560.0A0A022R356_ERYGU; Uncharacterized protein
STRINGPGSC0003DMT4000388521e-179(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9452492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-111WRKY family protein